Table 2. Comparison of the sensitivity of seven commercial master mixes for detecting porcine DNA by real-time PCR
Manufacturer | Platform | CT values for different concentrations of porcine DNA (ng/μL) |
5×101 | 5×100 | 5×10–1 | 5×10–2 | 5×10–3 | 5×10–4 |
Applied Biosystems | StepOnePlus | 17.77±0.53 | 20.60±0.47 | 23.97±0.46 | 28.44±0.93 | 31.00±0.08 | 34.79±0.33 |
CFX Connect | 17.38±0.23 | 20.01±0.18 | 24.65±0.04 | 27.92±0.32 | 32.15±0.04 | ND |
CancerROP | StepOnePlus | 18.54±0.09 | 20.56±0.12 | 25.44±0.47 | 29.18±0.48 | 32.09±0.72 | ND |
CFX Connect | 15.72±0.44 | 18.23±0.64 | 22.54±0.52 | 26.52±0.02 | 29.91±0.17 | 33.41±0.52 |
Invitrogen | StepOnePlus | 17.01±0.16 | 19.79±0.34 | 23.71±0.21 | 26.91±0.22 | 30.86±0.30 | 33.78±0.21 |
CFX Connect | 17.60±0.34 | 21.05±0.02 | 24.57±0.13 | 28.45±0.13 | 31.40±0.04 | 34.75±0.13 |
Kogene Biotech | StepOnePlus | 15.35±0.37 | 18.59±0.35 | 21.96±0.64 | 25.13±0.15 | 28.92±0.05 | 32.01±0.08 |
CFX Connect | 17.40±0.45 | 20.55±0.42 | 23.97±0.41 | 27.20±0.03 | 30.75±0.12 | 33.81±0.43 |
New England Biolabs | StepOnePlus | 17.27±0.04 | 19.82±0.24 | 24.39±0.09 | 27.85±0.05 | 31.16±0.19 | 34.38±1.03 |
CFX Connect | 17.61±0.11 | 19.11±0.69 | 22.38±0.34 | 25.89±0.48 | 29.65±0.54 | 32.56±0.16 |
Qiagen | StepOnePlus | 17.19±0.23 | 20.05±0.27 | 24.09±0.57 | 27.23±0.93 | 31.02±0.69 | 33.67±0.35 |
CFX Connect | 17.08±0.26 | 20.81±0.06 | 22.81±0.13 | 26.62±0.32 | 30.36±0.45 | 33.36±0.17 |
Takara | StepOnePlus | 18.69±0.37 | 22.00±0.45 | 26.47±0.18 | 29.91±0.69 | 33.28±0.21 | ND |
CFX Connect | 16.68±0.18 | 19.65±0.25 | 22.77±0.34 | 26.24±0.23 | 29.02±0.21 | ND |
Average CT values (mean±SD) for 50, 5, 0.5, 0.05, 0.005, and 0.0005 ng/μL porcine DNA analyzed in triplicate.
ND, not detected.