Table 3. Genotypes, antimicrobial resistance phenotypes, and fusidic acid resistance determinants of staphylococci isolated from pork meat and carcass samples

ID Species Resistance profiles MICs to mecA SCCmec type FA resistance genes fusA mutation MLST Score value1)
OXA (μg/mL) TET (μg/mL) FA (μg/mL)
SSA1 MRSA OXA-AMP-FOX-PEN-CHL-CIP-OXA-TET 6 64 0.25 + V - NA ST398 2.304
SSA2 MRSA OXA-AMP-FOX-PEN 192 0.5 0.125 + IV - NA ST2084 2.144
SSA3 MSSA AMP-PEN 0.5 1 0.19 - NA - NA ST5 2.204
SSA4 MSSA AMP-PEN-CHL-MUP 0.5 4 0.125 - NA - NA ST9 2.279
SSE1 S epidermidis OXA-AMP-FOX-PEN-ERY-FA 64 1 24 + IV fusB - ST172 2.362
SSE2 S. epidermidis OXA-AMP-PEN-FA 64 4 24 + IV fusB - ST130 2.32
SSE3 S. epidermidis OXA-AMP-FOX-PEN-FA 32 0.5 8 + IV fusB, fusC - ST80 2.293
SSE4 S. epidermidis OXA-AMP-PEN-CHL-ERY-FA-MUP-SXT 8 4 32 + V fusB - ST173 2.436
SSE5 S. epidermidis AMP-PEN-FA 0.25 2 8 - NA fusB - NT 2.375
SSE6 S. epidermidis AMP-PEN-FA 0.25 4 8 - NA fusB - NT 2.249
SSE7 S. epidermidis OXA-FA-MUP-TET 16 32 24 + IV fusB - ST768 2.293
SSE8 S. epidermidis AMP-PEN-FA 0.25 4 12 - NA fusB - NT 2.376
SSE9 S. epidermidis AMP-PEN-FA 0.25 2 24 - NA fusB V599I (GTT→ATT) NT 2.264
SSE10 S. epidermidis AMP-PEN 0.25 0.5 0.25 - NA fusB - ST1017 2.247
SSH1 S. hyicus AMP-PEN-CLI-SXT-TET 0.25 16 0.19 - NA - NA NA 2.138
RMS1 M. sciuri OXA-CLI-FA 2 0.5 12 - NA fusB/C - ST63 2.273
RMS2 M. sciuri OXA-FA 0.5 0.25 16 - NA fusB/C - NT 2.377
RMS3 M. sciuri OXA-FA 1 0.25 16 - NA fusB/C - ST30 2.274
SMS4 M. sciuri OXA-FA-TET 1 16 8 - NA fusB/C - ST63 2.227
SMS5 M. sciuri OXA-FA 1 1 16 - NA fusB/C - NT 2.433
SMS6 M. sciuri OXA-FA 1 0.5 12 - NA fusB/C - NT 2.324
SMS7 M. sciuri OXA-FA 1 0.5 16 - NA fusB/C - NT 2.212
SMS8 M. sciuri OXA-FA 1 0.5 24 - NA fusB/C - ST63 2.012
SMS9 M. sciuri OXA-CLI-FA 2 0.5 16 - NA fusB/C - ST63 2.01
SMS10 M. sciuri OXA-FA 0.5 0.25 12 - NA fusB/C - NT 2.343
SMS11 M. sciuri OXA-FA 2 1 8 - NA fusB/C - NT 2.257
SMS12 M. sciuri OXA-FA 1 1 12 - NA fusB/C - NT 2.13
SMS13 M. sciuri OXA-CLI-FA 0.5 0.25 16 - NA fusB/C - ST63 2.248
SMS14 M. sciuri OXA-FA 0.5 0.25 8 - NA fusB/C - NT 2.17
SMS15 M. sciuri OXA-FA 0.5 0.25 12 - NA fusB/C - NT 2.028
SMS16 M. sciuri OXA-CLI-FA 0.5 0.25 6 - NA fusB/C - NT 2.077
SMS17 M. sciuri OXA-FA 1 0.25 8 - NA fusB/C - ST63 2.214
SMS18 M. sciuri OXA-PEN-FA 2 0.25 8 - NA fusB/C - NT 2.056
SMS19 M. sciuri OXA-FA 0.5 0.25 12 - NA fusB/C - NT 2.203
SMS20 M. sciuri OXA-FA 1 8 12 - NA fusB/C - ST63 2.29
SMS21 M. sciuri OXA-FA-TET 1 16 8 - NA fusB/C - ST63 2.185
SMS22 M. sciuri OXA-FA 1 0.5 12 - NA fusB/C - ST63 2.203
SMS23 M. sciuri OXA-FA 1 0.25 8 - NA fusB/C - NT 2.336
SMS24 M. sciuri OXA-FA-TET 1 16 8 - NA fusB/C - ST30 2.218
SMS25 M. sciuri OXA-FA-TET 1 16 12 - NA fusB/C - ST30 2.277
SMS26 M. sciuri OXA-FA-TET 1 16 8 - NA fusB/C - ST30 2.272
SMS27 M. sciuri OXA-FA-TET 1 16 12 - NA fusB/C - ST30 2.085
SMS28 M. sciuri OXA-FA-TET 1 16 12 - NA fusB/C - ST30 2.081
SMS29 M. sciuri OXA-FA 1 0.25 12 - NA fusB/C - ST30 2.398
SMS30 M. sciuri OXA-FA 1 0.25 8 - NA fusB/C - ST30 2.325
SMS31 M. sciuri OXA-FA 1 0.5 12 - NA fusB/C - ST63 2.295
SMS32 M. sciuri OXA-PEN-FA 1 8 8 - NA fusB/C - ST96 2.282
Strains with score value of ≥2.000 were used in this study.
MICs, minimum inhibitory concentrations; OXA, oxacillin; TET, tetracycline; FA, fusidic acid; SCC, staphylococcal cassette chromosome; MLST, multi-locus sequence type; MRSA, methicillin-resistant S. aureus; AMP, ampicillin; FOX, cefoxitin; PEN, penicillin; CHL, chloramphenicol; CIP, ciprofloxacin; TET, tetracycline; NA, not applicable; MSSA, methicillin-susceptible S. aureus; MUP, mupirocin; ERY, erythromycin; SXT, trimethoprim/sulfamethoxazole; NT, not-typable stain; CLI, clindamycin; S. epidermidis, Staphylococcus epidermidis; M. sciuri, Mammaliicoccus sciuri.